Pairwise Alignments

Query, 235 a.a., SDR family oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., short-chain dehydrogenase from Pseudomonas simiae WCS417

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 17/235 (7%)

Query: 4   VIIGGSGGIGLAMVQEALNRFSEANVHATYHSTTPTWQHPR-LTWHALDATQEAQVQALS 62
           +IIG S G+GL +V++ L +  +        S     +    +    LD   +  V ALS
Sbjct: 8   LIIGASRGLGLGLVKQLLQQGWDVTATVRDPSKADALKAVGPVQIEKLDMDDQQAVIALS 67

Query: 63  EQFSQ--VDWLINCVGVLHTASKGPEKNLNALDADFFLYNLIHNALPSLLLAKHFTAKLK 120
           ++  +   D L    GV   A++ P     A     F  N    A+  + LA+ F  +++
Sbjct: 68  QRLKERTFDLLFVNAGVKGPANQEPGHATLAEVGQLFFTN----AVAPINLAQRFVGQIR 123

Query: 121 QSEAAKFATLSAKVGSICDNQLGGWYSYRASKAALNMLLKTLAIEWQRSLKKGVVLALHP 180
           + +    A +S+ +GS+          Y+ASKAALN +  T +   Q       VL+LHP
Sbjct: 124 K-DTGVLAFMSSVLGSVTIPDGSDLALYKASKAALNSM--TNSFITQLGDHTLTVLSLHP 180

Query: 181 GTTDTKLSAPFHSNVAPDKLFSPARVAHDLIGLIAAATPEQSGGFYAYDGQTLPW 235
           G   T +    ++++  D           L+  + A T +    F  Y G T+ W
Sbjct: 181 GWVKTDMGGE-NAHIDVD------TSVRGLVEQVNAYTGKGGHHFIDYKGDTIAW 228