Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Deoxyribodipyrimidine photo-lyase from Xanthobacter sp. DMC5

 Score =  120 bits (302), Expect = 8e-32
 Identities = 120/433 (27%), Positives = 184/433 (42%), Gaps = 32/433 (7%)

Query: 1   MSKKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKR 60
           M+    L WF +DLR+ DNP L   ++    +  LY     +P +       +W  A+  
Sbjct: 1   MTAAPSLLWFRDDLRLADNPALNALAETGAPIAALYVLDEDSPHIRPLGAAARWWLAQS- 59

Query: 61  FLNQTLADLDH-SLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIAR 119
            L    ADL H  +  + ++   T ++P  A       V   D   +A  G  +R   AR
Sbjct: 60  -LRALRADLSHHGIPLILRQGPATRIVPEVAAALGAATVAFNDRAGEA-EGKLDRAITAR 117

Query: 120 IH-QDFSSVHIHQQALHSLLSEPQLPFALEALPSTFTQF-RKQVETISLSAPMGYPHVLP 177
           +  +D   +H     LH       +      +P TF+ F R  +    LS P+  P  L 
Sbjct: 118 LAAEDRRVLHFCAHLLHP---PGTVLGGSGRMPRTFSSFHRAALRERDLSPPLPAPKRLK 174

Query: 178 PIEQGWQLPLMD-IVTEPNHSAFVGGEQA----GLTHCQNYFSSLLPSRYKETRNGLD-- 230
            + +  +   ++    EP    + GG +     G    +   S+ +    K    G D  
Sbjct: 175 GVTRAPEGDTLESFALEPEKPDWAGGLRTAWHVGEAAARQRLSAFIADGLKGYATGRDRP 234

Query: 231 GMDYSTKFSPWLALGAVSPKTIY-AMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRY 289
            +++ ++ SP L  G +SP+ I+ A+    +A             EL WRE+ Y      
Sbjct: 235 DLEHVSRLSPHLRFGEMSPRQIFFAVRHAVDAGEVPGSDAAKFEAELYWREFSYHL---- 290

Query: 290 GAKLFRFSGIGEKKPLTSFYAQRFLQ-------WKHGETPFPIVNACMRQLNQTGYMSNR 342
              L     I  +    SF A  + +       W+ G T +P+V+A MRQL QTG+M NR
Sbjct: 291 ---LAEDPDIARRNIQQSFDAFPWRECSGELKAWRRGLTGYPLVDAGMRQLWQTGWMHNR 347

Query: 343 GRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFNLE 401
            R +VAS L   L +DWR G  +F   LVD D  +N  +WQ++AG G D     R FN  
Sbjct: 348 VRMVVASFLAKHLLIDWRAGEDWFWDTLVDADAANNAASWQWVAGSGLDAAPYFRIFNPV 407

Query: 402 KQAHTYDPKGEFV 414
            Q   +DP G +V
Sbjct: 408 MQGEKFDPDGTYV 420