Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 3e-35
 Identities = 121/465 (26%), Positives = 207/465 (44%), Gaps = 67/465 (14%)

Query: 6   GLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQT 65
           GL WF  DLRV+DN  L +A +   +++C++ +                 + +  F+ ++
Sbjct: 15  GLMWFRRDLRVDDNAALYRALRACRQVVCVFVFDKAI------LDPLPTVDRRVEFIRES 68

Query: 66  LADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDFS 125
           L +L+  L  LG  L V   L  Q +  L   +++  ++ +     DE  A+ R  + F 
Sbjct: 69  LLELEAELRALGGALIVRHGLAAQEIPALAHDLDVQAVFANR---DDEPDALERDAKVFG 125

Query: 126 S-----VHIHQQALHSLLSEPQLPFALEALPSTFTQFRK----QVETISLSA-------- 168
           +     V  H     ++    ++        + FT +++    +V++  L +        
Sbjct: 126 ALANAGVTFHTYKDSTVFDRDEVMTKTGQPYTVFTPYKRAWLAKVDSFFLKSYPVRSHAD 185

Query: 169 -----PMGYPHVLPPI-EQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSRY 222
                P  Y   +P + E G++   +  +  P       G +   T  +++F  +   RY
Sbjct: 186 ALVPPPEAYREPMPSLGELGFEKSNLSTLEIPT------GTRGAGTLFEDFFERI--DRY 237

Query: 223 KETRN--GLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWRE 280
            E RN   + G  Y       L  G VS + + A L    ++ G   +  W+  EL+WR+
Sbjct: 238 DEARNFPAVRGPSY---MGVHLRFGTVSIRQM-ASLAHQLSLQGNAGAATWLS-ELIWRD 292

Query: 281 YFYWYARRYGAKLFRFSGIGEKKPLTSFYA-----------QRFLQWKHGETPFPIVNAC 329
           +++     +    +  +G GE K     Y            Q F  W  G T +P+V+A 
Sbjct: 293 FYFQILAHFP---YVHTG-GESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAA 348

Query: 330 MRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVG 389
           M Q+NQ+GYM NR R +VAS L  +LGLDWR G AYF   L D+++ SN G WQ+ +  G
Sbjct: 349 MLQINQSGYMHNRLRMVVASFLCKDLGLDWRRGEAYFALHLNDFELASNNGGWQWASSSG 408

Query: 390 ADPRG-SRQFNLEKQAHTYDPKGEFVAKWCGTACDKLNALENLAL 433
            D +   R FN   Q+  +DP+G+F+ ++      +L  L N A+
Sbjct: 409 CDAQPYFRIFNPVTQSERFDPEGKFIRRY----LPQLAGLSNAAI 449