Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., deoxyribodipyrimidine photo-lyase from Variovorax sp. OAS795

 Score =  126 bits (316), Expect = 2e-33
 Identities = 121/466 (25%), Positives = 205/466 (43%), Gaps = 69/466 (14%)

Query: 6   GLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYP-SITPFLARYAQQTQWGEAKKRFLNQ 64
           GL WF  DLRV+DN  L  A +   +++C++ +  +I   L R  ++ +       F+ +
Sbjct: 15  GLMWFRRDLRVDDNAALYHALRSCRQVVCVFVFDRAILDPLPRIDRRVE-------FIRE 67

Query: 65  TLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDF 124
           +L +LD  L  L   L V        +  L  ++++  ++ +     DE  A+AR  Q  
Sbjct: 68  SLVELDAGLQELSGGLIVRHAAALDEIPALAHELDVQAVFANR---DDEPDALARDAQVL 124

Query: 125 SSVHIHQQALHS-----------LLSEPQLPFA---------LEALPSTFTQ-FRKQVET 163
            ++       H+           +L++   P+          L  + S F + ++ +   
Sbjct: 125 GALANAGVTFHTFKDSTVFDRDEVLTKTGQPYTVFTPYKRSWLAKVDSFFLKSYQVRTHA 184

Query: 164 ISLSAPMG-YPHVLPPIEQ-GWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSR 221
            +L+ P G Y   +P +E+ G+    +  +  P       G        +++F  +   R
Sbjct: 185 DALAPPPGAYRAPVPSLEEIGFGKSNLSALEIPT------GSSGAAALFEDFFQRI--DR 236

Query: 222 YKETRN--GLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWR 279
           Y   RN   + G  Y       L  G VS + +  +  +      A  +T+    EL+WR
Sbjct: 237 YDAARNFPAVRGPSY---LGVHLRFGTVSVRQLAGVAHQLSLQGDAGAATW--LSELIWR 291

Query: 280 EYFYWYARRYGAKLFRFSGIGEKKPLTSFYA-----------QRFLQWKHGETPFPIVNA 328
           ++++     +       SG GE K     Y            Q F  W  G T +P+V+A
Sbjct: 292 DFYFQILAHFPHV---HSG-GESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDA 347

Query: 329 CMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGV 388
            M Q+NQ+GYM NR R +VAS L  +LGLDWR G  YF   L D+++ SN G WQ+ +  
Sbjct: 348 AMLQINQSGYMHNRLRMVVASFLCKDLGLDWRRGERYFALHLNDFELASNNGGWQWASSS 407

Query: 389 GADPRG-SRQFNLEKQAHTYDPKGEFVAKWCGTACDKLNALENLAL 433
           G D +   R FN   Q+  +DP+G+F+ ++      +L  L N A+
Sbjct: 408 GCDAQPYFRIFNPVTQSERFDPEGKFIRRY----LPQLAGLSNAAI 449