Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (318), Expect = 1e-33
 Identities = 118/438 (26%), Positives = 183/438 (41%), Gaps = 47/438 (10%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGE-----AKKRF 61
           L WF  DLR  DN  L  A    D +  +Y            A   QW +      +   
Sbjct: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYI-----------ATPEQWHQHHLAPIQADL 51

Query: 62  LNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQV----EITDIYVDAVAGSDERQAI 117
           + + LA+L   L+ L   L+   +  +QA    ++Q+      T +  +     DE+Q  
Sbjct: 52  IWRRLAELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRD 111

Query: 118 ARIHQDFSSVHIHQQALHS--LLSEPQLPFALEALPSTFTQFRK------QVETISLSAP 169
               Q  S   I   A     +L    +          FT F++      Q   I  + P
Sbjct: 112 QLAQQLLSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRP 171

Query: 170 MGY---PHVLPPI----EQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSRY 222
           +     P  L  +    EQ +  P +D  + P  + F          C+        +R 
Sbjct: 172 VALWNVPSALAELVWHPEQAFDYPRID--STPWAADFETVRAQLRDFCRERVQDYHQARD 229

Query: 223 KETRNGLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYF 282
              R G      ++  SP+LA+G +S +   A L    ++   ++       EL+WRE F
Sbjct: 230 FPAREG------TSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWRE-F 282

Query: 283 YWYARRYGAKLFRFSGIGEKKPLTSFYA--QRFLQWKHGETPFPIVNACMRQLNQTGYMS 340
           Y +       L +     E      ++   ++F  W  G+T +PIV+A MRQLNQTG+M 
Sbjct: 283 YQHLVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMH 342

Query: 341 NRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFN 399
           NR R +VAS L  +L +DWR+G  YF ++L+D D  +N G WQ+ A  G D +   R FN
Sbjct: 343 NRLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFN 402

Query: 400 LEKQAHTYDPKGEFVAKW 417
              Q   +DP G+F+ +W
Sbjct: 403 PVSQGEKFDPNGDFIRRW 420