Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Sphingobium sp. HT1-2

 Score =  108 bits (270), Expect = 4e-28
 Identities = 117/414 (28%), Positives = 179/414 (43%), Gaps = 64/414 (15%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQTL 66
           + WF  DLR++D   L  A+Q    +I LY     +P      +Q   G A + +L+ +L
Sbjct: 6   IIWFRQDLRLSDQAALAAAAQ-AGPVIPLYILDDESP------RQWAMGGASRWWLHHSL 58

Query: 67  ADLDHSLSTLGQKLWVTPLLPYQALRHLLTQV--EITDIYVDAVAGSDE----------R 114
           A LD  L   G +L    +L       +L QV  E     V A+   +           R
Sbjct: 59  ASLDERLRAKGSRL----ILRRGRCADVLAQVAKECGAQVVHAIRHHEPWWRNAEKGVAR 114

Query: 115 QAIARIHQDFSSVHIHQQALHSLLSEPQ---LPFALEALPSTFTQFRKQVETISLSAPMG 171
           Q   R+H     + +  +A+ +    P     PF+  A+         Q     + AP  
Sbjct: 115 QIDLRLHD--GGLLLPVEAVRTGGGTPYRIYTPFS-RAVMLHMPPAPPQPAPQRIEAPSH 171

Query: 172 YPHVLPPIEQGWQLPLMDIVTEPNH-SAFVGGEQAGLTHCQNYFSSLLPS--RYKETRNG 228
           +P       +GW L    +  +P+  S F      G    + Y  S L     Y   R+ 
Sbjct: 172 WPD--SDRLEGWNL----LPRDPDWASGFPADWSPGEEGAKRYLDSFLGEVGDYAVARD- 224

Query: 229 LDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFY---WY 285
           L   + +++ SP L  G +SP  ++     +       D+T ++  EL+WR+Y +   W 
Sbjct: 225 LPSQEGTSRLSPHLHFGEISPAKVW-----HRVAKAPGDATVYLK-ELIWRDYAHNQVWA 278

Query: 286 ARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ--------WKHGETPFPIVNACMRQLNQTG 337
              YG++          +P       R L+        WK G+T +PIV+A MRQL QTG
Sbjct: 279 LPAYGSE--------NAQPAFDAMHWRDLREARGDWTAWKRGQTGYPIVDAGMRQLWQTG 330

Query: 338 YMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGAD 391
           +M NR R + AS L+  L +DWR+GA +F   LVD D  +N  NWQ++AG G D
Sbjct: 331 WMHNRVRMIAASFLIKHLLIDWRHGARWFWDTLVDADYANNSVNWQWVAGSGVD 384