Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  130 bits (326), Expect = 1e-34
 Identities = 116/441 (26%), Positives = 195/441 (44%), Gaps = 40/441 (9%)

Query: 6   GLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQT 65
           GL WF  DLR  DN  L  A +   R+ C++ +   T  L     +    + +  F+ ++
Sbjct: 7   GLMWFRRDLRAEDNAALYHALKVCRRVWCVFVFD--TDILDDLQGRGLRADRRVEFIRES 64

Query: 66  LADLDHSLSTLGQK-------LWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAI- 117
           L +LD  L  LG++       L V      +A+  L  Q+ +  ++ +     DE  A+ 
Sbjct: 65  LVELDERLRALGREHGVEGVGLIVRHAPAARAIPALAQQLGVQAVFANH---DDEPAALE 121

Query: 118 --ARIHQDFS--SVHIHQQALHSLLSEPQLPFALEALPSTFTQFRKQ-VETISLSAPMGY 172
             AR+  D +   + +H    H +    ++          FT ++   ++ ++      Y
Sbjct: 122 RDARVFGDLAHAGILLHSHKDHVIFERREVLTQAGHAFGVFTPYKNAWLKALTPFHLKAY 181

Query: 173 PHV--------LPPIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLP--SRY 222
           P          +PP        L DI  EP + A +     G +     F   +    RY
Sbjct: 182 PVARYAGTLAGVPPEHAAPVPSLSDIGFEPTNLAQLA-LPPGASGAHALFEDFVDRIDRY 240

Query: 223 KETRN--GLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWRE 280
           +  RN   + G  Y    S  L  G +S + + ++  +      A  ST+    EL+WR+
Sbjct: 241 EGARNFPAVKGPSY---LSAHLRFGTISIRHLASVAYQMHLQGMAGASTW--LSELVWRD 295

Query: 281 YFYWYARRYGA---KLFRFSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTG 337
           +++     +     K F+      K        ++F  W  G T +P+V+A M Q+NQTG
Sbjct: 296 FYHQVLANFPHVVDKAFKPEYDAIKFEHGKHAREQFAAWCEGRTGYPLVDAAMAQINQTG 355

Query: 338 YMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPR-GSR 396
           YM NR R +VAS LV +LGL W++G  YF   L+D+D+ +N G WQ+ +  G D +   R
Sbjct: 356 YMHNRLRMVVASFLVKDLGLHWQWGERYFADHLIDFDLAANNGGWQWASSSGCDAQPWFR 415

Query: 397 QFNLEKQAHTYDPKGEFVAKW 417
            FN   Q+  +DP G+F+ ++
Sbjct: 416 IFNPVTQSEKFDPHGKFIRRY 436