Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Dickeya dadantii 3937

 Score =  134 bits (336), Expect = 8e-36
 Identities = 125/439 (28%), Positives = 190/439 (43%), Gaps = 50/439 (11%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEA--KKRFLNQ 64
           L WF +DLR+ DN  L  A Q  D  +          F+A   Q      A  +  FL  
Sbjct: 5   LVWFRHDLRLTDNLALHAACQDPDARV-------EAVFIATPQQWASHAMAPCQAAFLLG 57

Query: 65  TLADLDHSLSTLGQKLWVTPLLPYQA----LRHLLTQVEITDIYVDAVAGSDERQAIARI 120
            L  L   L      L       + A    L       ++T ++ +     +ERQ   ++
Sbjct: 58  NLRCLQQELREKSIPLHYRQCDDFAAGVRWLADFCRARQVTRLFYNRQYEWNERQRDQQL 117

Query: 121 HQDFSSVHIHQQALHSLLSEP-QLPFALEALPSTFTQFR---------KQVETISLSAPM 170
            Q  + V   +    SLL  P  +      +   FT FR         + V ++   A  
Sbjct: 118 EQALTDVTECRGFDDSLLLPPGSVVTGSGDMYKVFTPFRAAFLKQLQQRDVGSVPAPAAR 177

Query: 171 GYPHVLPPIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSRYKETRNGLD 230
               + P     +  P  D+     H+ F  GE A L   + +    +   Y E R+ L 
Sbjct: 178 QQGDITPASLAPFDYPQTDV-----HADFPAGEPAALQRLRQFCREQVMF-YHEQRD-LP 230

Query: 231 GMDYSTKFSPWLALGAVSPKTIYAML--QRYEAVHGANDSTYWIFFELLWREYFYWYARR 288
            +  ++K SP+LALG +SP+  +  L  +  + +  +    +  F EL+WRE++      
Sbjct: 231 ALAATSKLSPYLALGVLSPRQCFNRLRMEHPDWLARSESGAFTWFNELVWREFY------ 284

Query: 289 YGAKLFRFS-GIGEKKPLTSFYAQ--------RFLQWKHGETPFPIVNACMRQLNQTGYM 339
               L  FS  + + +P  S+  +            W+ GET +PIV+A MRQLNQTG+M
Sbjct: 285 --RHLLVFSPALCKHQPFISWTRRVAWRNAPDELAAWQRGETGYPIVDAAMRQLNQTGWM 342

Query: 340 SNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQF 398
            NR R + AS LV +L +DW  G  YF +QL+D D+ +N G WQ+ A  G D     R F
Sbjct: 343 HNRLRMICASFLVKDLLIDWCEGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIF 402

Query: 399 NLEKQAHTYDPKGEFVAKW 417
           N   Q   +DP+GEF+ +W
Sbjct: 403 NPTTQGERFDPEGEFIRRW 421