Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., deoxyribodipyrimidine photo-lyase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  115 bits (288), Expect = 3e-30
 Identities = 117/437 (26%), Positives = 191/437 (43%), Gaps = 38/437 (8%)

Query: 1   MSKKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKR 60
           M+ K  + WF  DLR++DNP L  A++    ++ +Y        +     +   G A + 
Sbjct: 1   MATKPVILWFRRDLRLHDNPALNHAAETGRPILPVY--------IRDEHFERPMGAASRW 52

Query: 61  FLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARI 120
           +L+++L  LD +L   G +L +        L+ L+ + +   ++++ +   +  +  A +
Sbjct: 53  WLDKSLRALDAALQDRGSRLILRQGNALNQLQALIGETDADTVFMNRLFEPEAFEHDAEL 112

Query: 121 HQDFSSVHIHQQALH-SLLSEPQLPFALEALP-STFTQF-RKQVETISLSAPMGYPHVLP 177
                +  +     + +LL  P         P   FT F R  + T    A    P  + 
Sbjct: 113 AHALKADGVECLGFNGALLCRPGAVLNGSGQPYKVFTPFLRALLATAEAPAHTTGPRQIQ 172

Query: 178 PIEQ-------GWQLPLMDIVTEPNHSA---FVGGEQAGLTHCQNYFSSLLPSRYKETRN 227
             ++       GW+L        P+ S    +  GE         + SS L S Y + R+
Sbjct: 173 TPKRVQSDDLDGWKLH----PHRPDWSKGFDWTPGEDGASQALSKFISSGLKS-YSKDRD 227

Query: 228 GLDGMDYSTKFSPWLALGAVSP-KTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYA 286
             D    +++ SP L  G +SP + I    Q  +    ++        E+ WRE+     
Sbjct: 228 FPDRQGANSRLSPHLHWGEISPWRAIDRARQAAKDGKVSSAEADKFISEIGWREFSAHLL 287

Query: 287 RRYG---AKLFR--FSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSN 341
             +     + FR  +  +  +K   S  A     W+ G T +P+V+A MRQL  TG+M N
Sbjct: 288 HHFPFITERAFRPEYDAMPWRKDDASLNA-----WRQGRTGYPLVDAGMRQLWTTGWMHN 342

Query: 342 RGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFNL 400
           R R +VAS L+  L +DWR G A+F   LVD D  SN  NWQ++AG GAD     R FN 
Sbjct: 343 RVRMVVASFLIKHLLIDWREGEAWFWDTLVDADRASNVQNWQWVAGSGADASPFFRIFNP 402

Query: 401 EKQAHTYDPKGEFVAKW 417
             Q   +DP G +V +W
Sbjct: 403 ITQGEKFDPDGGYVRRW 419