Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., deoxyribodipyrimidine photolyase, FAD-binding from Escherichia coli BL21

 Score =  113 bits (282), Expect = 2e-29
 Identities = 126/471 (26%), Positives = 199/471 (42%), Gaps = 48/471 (10%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARY-AQQTQWGE-----AKKR 60
           L WF  DLR++DN  L  A           C  S    LA Y A   QW        +  
Sbjct: 5   LVWFRQDLRLHDNLALAAA-----------CRNSSARVLALYIATPRQWATHNMSPRQAE 53

Query: 61  FLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQV----EITDIYVDAVAGSDERQA 116
            +N  L  L  +L+  G  L    +  + A   ++ QV     +T ++ +     +ER  
Sbjct: 54  LINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERAR 113

Query: 117 IARIHQDFSSVHIHQQALHSLLSEPQLPFALEALPSTFTQFRKQVETISLSAPMGYPHVL 176
              + +   +V         +L    +      +   FT F K      L   M      
Sbjct: 114 DVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPF-KNAWLKRLREGMPECVAA 172

Query: 177 PPIEQGWQLPLMDIVT--EPNHSA----FVGGEQAGLTHCQNYFSSLLPSRYKETRNGLD 230
           P +     +     +T   P  S     F   E+A +   + +  +     Y++ R+   
Sbjct: 173 PKVRSSGSIEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGA-GEYEQQRD-FP 230

Query: 231 GMDYSTKFSPWLALGAVSPKTIYAML--QRYEAVHGANDSTYWIFFELLWREYFYWYARR 288
            ++ +++ S  LA G +SP+     L  ++ +A+ G   S +    EL+WRE FY +   
Sbjct: 231 AVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVW--LSELIWRE-FYRHLMT 287

Query: 289 YGAKLFR---FSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQ 345
           Y   L +   F    ++    S  A     W+ G+T +PIV+A MRQLN TG+M NR R 
Sbjct: 288 YYPSLCKHCPFIAWTDRVQWQSNPAH-LQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRM 346

Query: 346 LVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFNLEKQA 404
           + AS LV +L +DWR G  YF +QL+D D+ +N G WQ+ A  G D     R FN   Q 
Sbjct: 347 ITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQG 406

Query: 405 HTYDPKGEFVAKWCGTACDKLNALENLALDSVDMVDWPIAASAYLLIHHPQ 455
             +D +GEF+ +W       L  L ++   +V    W  A  A +++ +PQ
Sbjct: 407 EKFDREGEFIRRW-------LPELRDVPGKAVH-EPWKWAQKAGVMLDYPQ 449