Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Deoxyribodipyrimidine photo-lyase from Alteromonas macleodii MIT1002

 Score =  122 bits (305), Expect = 3e-32
 Identities = 125/445 (28%), Positives = 193/445 (43%), Gaps = 54/445 (12%)

Query: 1   MSKKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKR 60
           M+  + + WF  DLRV DNP L  A   + +++ +Y Y    P         + G A K 
Sbjct: 1   MTVPVSIMWFRQDLRVKDNPALNAACD-MGKIVPIYIYDDTAP------NGREPGGASKW 53

Query: 61  FLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARI 120
           +L+ +L+ L+  L+     L +    P   + +L+       I+ +      E   I R 
Sbjct: 54  WLHHSLSSLNKRLNG---HLQIFKGDPQTLIPNLMKSFNAKGIFWNRCY---EPWQINRD 107

Query: 121 HQDFSSVHIHQQALHS----LLSEPQLPFALEALP-STFTQFRKQVETISLSAPMGYPHV 175
                ++  H    HS    LL EP      +  P   FT + K+   + +  P  YP  
Sbjct: 108 KTIKKTLIEHDYEAHSCNGSLLWEPMKVLKKDGTPYRVFTPYYKK-GCLQVEEPR-YPKA 165

Query: 176 LPPIEQGWQ--------LPLMDIVTEPNHSAFVG-----GEQAGLTHCQNYFSSLLPSRY 222
            PP    +         L  +D++   +  A +      GE     +  ++  +    +Y
Sbjct: 166 -PPARITYADVDNDSDGLTSLDLLPSIDWDATIEKEWSPGEDGAADNLADFIENSA-RKY 223

Query: 223 KETRNGLDGMDYSTKFSPWLALGAVSPKTI-YAMLQRYEAVHGANDSTYWIFFELLWREY 281
           K+ R+ +   + +++ SP L  G VSP  + YA+  ++      +  TY    EL WRE+
Sbjct: 224 KDGRD-IPSANGTSRLSPHLHFGEVSPNQVWYAIKDKFGNSEDKSIETY--LSELGWREF 280

Query: 282 FYWYARRYGAKLFRFSGIGEKKPLTSFY-------AQRFLQWKHGETPFPIVNACMRQLN 334
            Y+        LF F  +  K     F        A+    W+ G T  PIV+A MR+L 
Sbjct: 281 SYYL-------LFHFPTLPNKNFNEKFDKFPWRTDAKALKAWQKGNTGIPIVDAGMRELW 333

Query: 335 QTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG 394
           QTGYM NR R +V S LV  L L W  G  +F   L+D D+ SN  +WQ++AG GAD   
Sbjct: 334 QTGYMHNRVRMIVGSFLVKNLLLSWHEGERWFWDTLLDADLASNSASWQWVAGSGADAAP 393

Query: 395 -SRQFNLEKQAHTYDPKGEFVAKWC 418
             R FN   Q   +D KG +V K+C
Sbjct: 394 YFRIFNPILQGEKFDKKGNYVRKYC 418