Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., Cryptochrome DASH from Alteromonas macleodii MIT1002

 Score =  357 bits (917), Expect = e-103
 Identities = 190/421 (45%), Positives = 254/421 (60%), Gaps = 12/421 (2%)

Query: 6   GLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYP--SITPFLARYAQQTQWGEAKKRFLN 63
           GLYWF +DLR++DN  +    ++V ++  LY     + TP    +A     G+ +  FL 
Sbjct: 17  GLYWFRHDLRLHDNAAISALCEEVQQVTFLYILDDKAFTPTTYGFAPM---GKHRHTFLL 73

Query: 64  QTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQD 123
           QTL DL   L+ LG  L +    P + L  L+   + + + V    G DER  +  + + 
Sbjct: 74  QTLVDLKRQLAKLGHDLLIVKGDPAERLVQLMKSGQYSHLGVSEHCGFDERAQLNTVKRF 133

Query: 124 FSSVHIHQQALHSLLSEPQLPFALEALPSTFTQFRKQVET----ISLSAPM-GYPHVLPP 178
           F SV + +     L     LPF ++ +P  F+ FR++VE     +S+  PM   P    P
Sbjct: 134 FDSVTVIETPTFGLFDAQTLPFNIKEMPDVFSPFRRKVEKHCKPLSVHPPMESLPSPFTP 193

Query: 179 -IEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNY-FSSLLPSRYKETRNGLDGMDYST 236
            +++ +   +   +  P+ S+FVGGE A LTH   Y F     + YK+TRN LD    ST
Sbjct: 194 QLDESFLFAIDTDLPSPSQSSFVGGETAALTHLNTYLFDWKAAATYKDTRNALDTWQDST 253

Query: 237 KFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRF 296
           K S WLA G++S + +   +Q++EA    NDSTYWI+FELLWRE+F+W   +YGA  FRF
Sbjct: 254 KLSAWLANGSLSAREVIRQVQQFEATVEKNDSTYWIYFELLWREFFHWLQCKYGANWFRF 313

Query: 297 SGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVHELG 356
            GI  KKP T    + F  W  G+T +PIV+ACMRQL +TGYMSNRGRQLVASC VHEL 
Sbjct: 314 GGIQGKKPSTQHCPETFALWCEGKTGYPIVDACMRQLAETGYMSNRGRQLVASCFVHELR 373

Query: 357 LDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTYDPKGEFVAK 416
            DWR+GAA+FE QL+DYDVGSNWGNW YLAGVG+DPRG RQFNL+KQ   YD  G+F  K
Sbjct: 374 QDWRFGAAWFEHQLIDYDVGSNWGNWLYLAGVGSDPRGHRQFNLQKQTEIYDSDGQFRKK 433

Query: 417 W 417
           W
Sbjct: 434 W 434