Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., General secretion pathway protein A from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 18/203 (8%)

Query: 128 RDIYMNEDSRYVLA-AMKDVARNQGILAVVGDSGAGKSVLRRLLLDELHNDGDISVI-QP 185
           R ++M+E  R  LA  +  +    G + + G+ GAGK+ + R  L+++     ++ I  P
Sbjct: 24  RYLFMSERHREALAHLLYGIRGGGGFVLLSGEIGAGKTTICRCFLEQIPEQCRVAYIFNP 83

Query: 186 KIIDKTRATAAGICDAIISDISSEAPKR-----SMEAKARQVERLLMTAFKGGQRHVLII 240
           K+      T   +   I S+   E         +++     +   L+ +   G+R+VLII
Sbjct: 84  KL------TVGDLLKTICSEFRIEVKHEGIGPATIKDHLDPLNEYLLQSHARGERNVLII 137

Query: 241 EEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRHYELREFIRRCMVI 300
           +EA +LT  V++ L+    LE    KLL I+L+GQ EL   L      EL +  +R +  
Sbjct: 138 DEAQNLTPHVLEQLRLLTNLETNERKLLQIILIGQPELREVL---ARPELEQLAQRVIAR 194

Query: 301 EVPPLDNDIEA--YLKHKFERAG 321
                 N+ E   Y++H+ + AG
Sbjct: 195 FHLGALNEAETRQYIQHRMQVAG 217