Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., MSHA biogenesis protein MshM from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 30/264 (11%)

Query: 110 MKHFKLFRNPFINDIRAVRDIYMNEDSRYVLAAMK-DVARNQGILAVVGDSGAGKSVLRR 168
           ++HF L   PF +   + +  + +E S+  L  +   V+  +G + + G+ G GK++L R
Sbjct: 3   LEHFGLQAFPF-SITPSTQFFFSSETSQEALNTLLIAVSMGEGFMKITGEVGTGKTMLCR 61

Query: 169 LLLDELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSEA--PKRSMEAKARQ----- 221
            LL  L  +  +  I    ++           A+  ++++E   P+   E   +      
Sbjct: 62  KLLGALGEEYAVGYIFNPYLEPL---------ALFIELAAELGLPRPVPEGMTQHEILNA 112

Query: 222 VERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHR 281
           + R ++     G+R V+ ++EA  + I  ++ L+    LE    KLL +++ GQ EL  R
Sbjct: 113 LTRRVLELNDSGKRVVICLDEAQAMPIETLEALRLLTNLETESRKLLQVIIFGQPELDER 172

Query: 282 LDERRHYELREFIRRCMVIEVPPLD-NDIEAYLKHKFERAGCEYERIMDDSAVPALKLRL 340
           L+     +LR+  R      + PL  ++   Y++H+   AG    ++    A+  L+ + 
Sbjct: 173 LNHPSVRQLRQ--RITFHYHLKPLSHSEFSYYVQHRLAAAGYRRGQLFTPLALWMLRRK- 229

Query: 341 QTRRNQSGSLVYPQVINNLVTKAM 364
                   S   P++IN L  KAM
Sbjct: 230 --------SRCVPRLINVLANKAM 245