Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., AAA family ATPase from Erwinia tracheiphila SCR3

 Score =  240 bits (613), Expect = 4e-68
 Identities = 150/388 (38%), Positives = 233/388 (60%), Gaps = 23/388 (5%)

Query: 15  MNTLRARLDKAGTSIQALADYLAMNYSTVQRAVKMNEPPKRRAEEFKEKVEAFFASHGLE 74
           M  L+ +L +A     A+A  +A++ +T+ + V  NE P+   E  ++++ ++  S G++
Sbjct: 1   MLVLKQQLKEARIPQAAVARAVAVSEATLAQIVNHNEWPRTSPEAVRQRLASYLESQGID 60

Query: 75  GVSGWS--KAATNDQPDPQTETNRELELENPMLTQEAM-----KHFKLFRNPFIND-IRA 126
               +   + A   +    T+     E EN +L ++ +     K F LFR+PF ++ ++ 
Sbjct: 61  TAKSFDAVQGAATPRTAGTTDKTNLSEAENMLLKKQVLFPATKKAFGLFRDPFADEAMQG 120

Query: 127 VRDIYMNEDSRYVLAAMKDVARNQGILAVVGDSGAGKSVLRRLLLDELHNDG-DISVIQP 185
             D++   D RYV  A+   AR+ G LA++G+SGAGKS LRR L++ ++ +   + VI+P
Sbjct: 121 ADDVFTTPDIRYVREALFQTARHGGFLALIGESGAGKSTLRRDLIERVNRENAPVIVIEP 180

Query: 186 KII--------DKTRATAAGICDAIISDISS-EAPKRSMEAKARQVERLLMTAFKGGQRH 236
            II         KT   AA I +AI S I+  E+ KRS +A+ RQ+ R+L  + + G  H
Sbjct: 181 YIIAMEDNDVKGKT-LKAAAIAEAINSTIAPLESIKRSQDARFRQLHRVLKDSSQAGFSH 239

Query: 237 VLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRHYELREFIRR 296
           VL+IEEAH L IP +K+LKRF+ELE GF KLL I+L+GQ EL  +L E R+ E+RE ++R
Sbjct: 240 VLVIEEAHSLPIPTLKHLKRFFELESGFKKLLSIVLIGQPELADKLSE-RNMEVREVVQR 298

Query: 297 CMVIEVPPLDNDIEAYLKHKFERAGCEYERIMDDSAVPALKLRLQ---TRRNQSGSLVYP 353
           C V+E+ PLDN +E +L  K +RAG +   IMD SAV A++ RL    + R    SL+YP
Sbjct: 299 CEVVELLPLDNSLEEFLTFKLQRAGKQLADIMDASAVEAIRARLSNAGSNRKSMVSLLYP 358

Query: 354 QVINNLVTKAMNLCASLGEDKVNEDIIK 381
             ++NLV  AMNL A +G  +VN D+++
Sbjct: 359 LAVSNLVIAAMNLAAEIGVPQVNADVVR 386