Pairwise Alignments

Query, 346 a.a., phage tail tape measure protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., tape measure protein from Erwinia tracheiphila SCR3

 Score =  140 bits (354), Expect = 7e-38
 Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 27/355 (7%)

Query: 1   MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNR- 59
           MA  L+  I+++L G++AQ++R Y+  ++++A  S+ A   + +S +  S  ID  G+  
Sbjct: 1   MAGQLRASIIIDLMGNIAQRSRQYAGNISSMARSSQVAMRGLRTSVVNVSNSIDRLGSSA 60

Query: 60  -----LLFITGAAAVGFERT----FVKTAAEFERYQTMLNKL-QGSPEAGAKAMAWIEEF 109
                +L   GA   G   T    F+  A+  E  +  +N L +G+ +   + M W  + 
Sbjct: 61  TRTFGMLAAGGATVAGLGYTANKLFISIASTRENQRIAMNSLYKGNQQHATQMMQWAIQN 120

Query: 110 TQNTPYAIDEVTQSFVRLKAFGI--DPMDGTMQSIADQAAMIGGTAETVEGIATALGQAW 167
            +++ + +  V Q F + KAFG+  D     +  + DQ A+ G      +G +  L Q +
Sbjct: 121 AKDSTWGLTGVMQEFTQSKAFGMSDDQTKNFITMLQDQGALKGWDLSAAQGASLQLKQMF 180

Query: 168 TKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRA 227
           ++ ++ + +A  L   G+ V+  L ++          G    ++ D  +KGKLG   I  
Sbjct: 181 SRQQITAADANLLTGYGINVYQKLAEAM---------GKDIRKVQDDGAKGKLGPKTIEL 231

Query: 228 LIKQMGKESAGAAKEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDE 287
           L + + +E+ GA K  MN+W G+ + MGD W+ F   +M  G F  LK QL + LG  D 
Sbjct: 232 LFRLLQEEAKGAQKNAMNSWTGLTAQMGDVWEDFADKLMNKGPFERLKGQLRDVLGWYDR 291

Query: 288 MKKTGEYD-EFVDKVGRDLVEAFKSAAAAAREIKEVGEELWPVIREIGSMACSGI 341
           + K G      +D +  DL + F +A  +   IK   ++ W V+R +G  A S +
Sbjct: 292 ISKPGANGLSELDTLTDDLADKFNTAFIS---IKSAADQAWRVLR-MGKNALSWV 342