Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

 Score =  132 bits (333), Expect = 9e-36
 Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 5/274 (1%)

Query: 42  AKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEA 101
           A+ +A  ++  ++G +++ ++PS+QLG D  ML QL  G ++        +   +P A  
Sbjct: 56  AQEMAAKIKAETKGRVEINIFPSSQLGGDTDMLSQLRSGAIEFFTLSPLILSTLVPNASI 115

Query: 102 VMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDT-WYNGTRE-TTSNRPLNSIE 159
             + +   D+  + +  + D G  VR + + K    A+D  W NG R+ TTS +P+ +  
Sbjct: 116 SGIGFAFPDYASVWKAMDGDLGTYVRGQ-ISKAGIVAMDKIWDNGFRQITTSTKPIETAA 174

Query: 160 DFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYE 219
           D KGLK+RVP +    +  K   ++P  ++F+EVY ALQT AVD QENPL  I T K YE
Sbjct: 175 DLKGLKIRVPVSPLWTSMFKAFDSAPASLNFAEVYTALQTRAVDAQENPLAIISTAKLYE 234

Query: 220 VQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSF 279
           VQK  ++T+H+ +    + +   ++KL D  + I+ K + + G      V      L   
Sbjct: 235 VQKYCSLTNHMWDGFWFLANRRAFEKLPDDLRAIVAKNINEAGLKQRDDVFALNNNLRKE 294

Query: 280 FKSEGINVTYPDLEPFREAMQP--LYKEFDSNIG 311
              +G+    P ++ FR+ ++    Y E+    G
Sbjct: 295 LAEKGLTFNEPKVDSFRDQLRKAGFYAEWKGKYG 328