Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., 2,3-diketo-L-gulonate-binding periplasmic protein YiaO from Xanthobacter sp. DMC5

 Score =  110 bits (276), Expect = 4e-29
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 5/263 (1%)

Query: 53  SQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFD 112
           + G + ++L+P+ QLG D  M+ QL  G L++       +   +P      + +    +D
Sbjct: 66  TDGALDISLFPNNQLGSDPDMMSQLRSGALELATMPGTVLSTILPITALTGVGFAFTSYD 125

Query: 113 HLRRMFESDFGQGVRDEMLQKFNWRALD-TWYNGTRE-TTSNRPLNSIEDFKGLKLRVPN 170
            +    +   G  +R  ++ K N    D  W NG R+ T+S RP+    D  G K+RVP 
Sbjct: 126 KVWAAMDGAVGDLIRSNLV-KANLVGFDKVWDNGFRQITSSTRPIREPGDLAGFKIRVPL 184

Query: 171 AKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHI 230
               ++     GASP  +  +E Y ALQT   DGQENPL  I T KF+EVQK  ++T+H 
Sbjct: 185 VPLWVSMFSAFGASPVSIPLAEAYSALQTKIADGQENPLALIYTAKFFEVQKYCSLTNHA 244

Query: 231 VNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYP 290
            +   ++ S   W+ + D  K ++ K            +      L +  +++G+     
Sbjct: 245 WDGFWLLASGKVWKSVPDDLKQVMAKHFNAAAIKQRSDIVKANQTLQADLEAKGLVFNTT 304

Query: 291 DLEPFREAM--QPLYKEFDSNIG 311
           + E F++A+     YK+  +  G
Sbjct: 305 NAEVFQQALAKTSFYKDARAKFG 327