Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

 Score =  128 bits (322), Expect = 2e-34
 Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 9/306 (2%)

Query: 6   KITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSA 65
           K T+      A +S   A  +K       G     + + +   L + S GE+    +P  
Sbjct: 4   KRTLLAAACFALSSAAHALEIKFADIHPAGYPTVVAEENMGKALTQASNGELTFKYFPGG 63

Query: 66  QLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQG 125
            LG ++ +++Q  +G + +T    G +G  +P      LP+V +D  H+R++ + + G  
Sbjct: 64  VLGSEKEVVEQAQVGAIQMTRVSLGIVGPVVPDVNVFNLPFVFRDQAHMRKVIDGEIG-- 121

Query: 126 VRDEMLQK-----FNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL 180
             DE+L K     F   AL     GTR   + +P+  IED KG+K+RV      +     
Sbjct: 122 --DEILAKITDSEFGLVALAWMDGGTRNLYTKKPVRKIEDLKGMKIRVQGNPLFIEAFNE 179

Query: 181 SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE 240
            GA+   M   E++ ALQT  +DG EN  PT+     ++  K   +T H++  + +++S+
Sbjct: 180 MGANGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQNAKYYTLTEHLILPEPIVMSK 239

Query: 241 STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ 300
            TW KL+   +D+++KA +            + A   +  K+ G+     D +PF +A  
Sbjct: 240 ITWNKLTPAQQDMVKKAAKAAQADERVLWDAKSASSETKLKAAGVEFITVDKKPFYDATA 299

Query: 301 PLYKEF 306
           P+  ++
Sbjct: 300 PVRAKY 305