Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score =  137 bits (346), Expect = 3e-37
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 5/315 (1%)

Query: 10  AILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGD 69
           A+L  S  A+     TLK   Q   G  +   A+  AD +   S G++K+ L+    LG 
Sbjct: 19  AVLAASGVAAQVKERTLKFAFQNQTGHPQALGAQKFADLVAAKSDGKMKVKLFAGGVLGG 78

Query: 70  DRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDE 129
           D   +  L  G +++T    G +   +    A   P++  D      + +  FGQ +  +
Sbjct: 79  DLQTVSALQGGTIELTVLNAGILSAQVKEFAAYDFPFLFNDGKEADAVTDGPFGQKLMAK 138

Query: 130 MLQKFNWRALDTWYNGTRE-TTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPM 188
           +  K  +  L  W  G R  T S RP+   +D  GLK+RV  +   ++     GA+ TP+
Sbjct: 139 LEDKGLY-GLGYWDLGFRNLTNSRRPITRADDITGLKIRVIQSPIYIDVFSALGANATPL 197

Query: 189 SFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSD 248
            F E+Y AL+  AVDGQENP  TI + KF EVQK +  T HI N Q ++IS+ TW  +S 
Sbjct: 198 PFPELYPALEQKAVDGQENPNTTILSSKFSEVQKYITQTRHIYNPQALLISKKTWDSMSA 257

Query: 249 TDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTY---PDLEPFREAMQPLYKE 305
            +K I+ +A  +         +      +   K  G+ V+     ++   R  ++P+  +
Sbjct: 258 EEKKILTQASNEATVFQRAASRGAADGALDALKKAGMTVSEISPEEMTKLRAKVKPVIDK 317

Query: 306 FDSNIGQPIVSKLAA 320
           + +++G   V +L A
Sbjct: 318 YAASVGDTTVKELMA 332