Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 1e-36
 Identities = 76/303 (25%), Positives = 150/303 (49%), Gaps = 2/303 (0%)

Query: 6   KITIAILTLSAAASVNA-ATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPS 64
           K+ +A+L  + + ++ A A  +K       G     + + +   LE+ S GEI   ++  
Sbjct: 6   KLLLAVLPFAFSVAMPASALDIKFAEIHPAGYPTVVAEQNMGKKLEDASNGEITFKMFAG 65

Query: 65  AQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQ 124
             LG ++ +++Q  +G + +T    G +G  +P      +P+V +D DH+R++ + + GQ
Sbjct: 66  GVLGSEKEVIEQAQIGAVQMTRVSLGIVGPVVPDVNVFNMPFVFRDHDHMRKIIDGEIGQ 125

Query: 125 GVRDEMLQK-FNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGA 183
            + D++    FN  AL     G+R   + +P+ S+ED KG+K+RV      ++     G 
Sbjct: 126 EILDKITNSDFNLVALAWMDGGSRSIYTKKPVRSLEDLKGMKIRVQGNPLFIDMMNAMGG 185

Query: 184 SPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTW 243
           +   M   E++ ALQT  +DG EN  PT+     ++  K   +T H++  + V++S++TW
Sbjct: 186 NGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQSAKYYTLTGHLILPEPVVMSKTTW 245

Query: 244 QKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLY 303
            KLS   + +++K  ++           + A      K+ G+     D +PF +A   + 
Sbjct: 246 NKLSPEQQALVKKVAREAQMEERALWDAKSAASEEKLKAAGVEFITVDKKPFYDATASVR 305

Query: 304 KEF 306
           +++
Sbjct: 306 EKY 308