Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., TRAP transporter substrate-binding protein from Pseudomonas segetis P6

 Score =  127 bits (318), Expect = 5e-34
 Identities = 77/287 (26%), Positives = 146/287 (50%), Gaps = 3/287 (1%)

Query: 7   ITIAILTLSAA--ASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPS 64
           I +A+  L+AA  +S+  A T ++ +    G  ++      A+ L+  + G+    L+ +
Sbjct: 11  IVLALCLLAAAMGSSITQAKTFRVAVGDGAGGTQHELGLKFAEELKARTGGKDDAKLFLN 70

Query: 65  AQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQ 124
            QLG +   +    +G LD +      +  + P    + +PY+ +  D    + +SD G+
Sbjct: 71  GQLGSEEDTVSNAAMGTLDFSILAINNVTPFSPSVGILTMPYMIQSLDDAVTLTQSDIGK 130

Query: 125 GVRDEMLQKFNWRALDTWYNGTRE-TTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGA 183
            + D  ++    R +   Y+G R  T S +P+ ++ED  GL++RVP  +  ++  +  G 
Sbjct: 131 TLIDNTVRDAGVRIIGWAYSGFRVLTNSKKPVKTVEDLAGLQIRVPKNEIMIDTYRAWGI 190

Query: 184 SPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTW 243
           +PTPM++SE +  LQ   VDGQ+NP  T+  MKF EVQK +    ++ + + +I+SES +
Sbjct: 191 NPTPMAWSETFTGLQLKVVDGQDNPYLTVNAMKFDEVQKYVTNLRYLFSIEPLIVSESMF 250

Query: 244 QKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYP 290
           Q+ S   + II  A +       + +  QE  +     ++G+ ++ P
Sbjct: 251 QEQSPQMQQIILDAGKAATLHSAKWLVEQEDRIKQELVTKGMEISDP 297