Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  143 bits (360), Expect = 7e-39
 Identities = 94/319 (29%), Positives = 160/319 (50%), Gaps = 13/319 (4%)

Query: 10  AILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGD 69
           A+ T   A +     T+++ M  S       +    ++ L   S G+ K+  +  A LG 
Sbjct: 21  AVFTTGLAQAEFQDRTVRISMTGSKDHPAGIALTKTSECLAAKSGGKFKMRPFFEAVLGP 80

Query: 70  DRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDE 129
           ++A L Q+  G LD            +P+     LP++  D+  +  + +  FG     E
Sbjct: 81  EQANLTQVRSGSLDGAVITTAATAPAVPQLGVFDLPFLVSDYKEIDALLDGAFG-----E 135

Query: 130 MLQKFNWRA----LDTWYNGTRETT-SNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGAS 184
            L  F   A    L  W +G R  T S RP+N +ED +GLKLRV   K  ++     GA+
Sbjct: 136 RLAGFYGAAGLVHLSFWEHGFRNVTNSRRPINKLEDLQGLKLRVIQNKTFIDTFTQLGAN 195

Query: 185 PTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQ 244
           P PM F+EVY AL+T A+DGQENP+  ++T K YEVQK++A+T H+ +    I S++ + 
Sbjct: 196 PVPMPFTEVYSALETKAIDGQENPVAFLQTSKLYEVQKHVALTRHVYSPVNFIYSKTQYD 255

Query: 245 KLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYP---DLEPFREAMQP 301
           KL+  ++  ++    +    + Q  +  E +  ++ K++G+ +T P   +LE  RE  + 
Sbjct: 256 KLAPDEQKALKDCAMENRLVNRQLGRDMEDKSAAYLKTQGVAITEPSKAELERMREKTKV 315

Query: 302 LYKEFDSNIGQPIVSKLAA 320
           +Y    + +G  +++ L A
Sbjct: 316 VYANQTAVLGPDLINALNA 334