Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  130 bits (328), Expect = 3e-35
 Identities = 91/322 (28%), Positives = 150/322 (46%), Gaps = 16/322 (4%)

Query: 1   MKTINKITIAILTLSA----AASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGE 56
           MK     T + + L+     A    A TTLK+          + +   LAD  +  S GE
Sbjct: 1   MKNTRSFTTSAVLLAGCLLLAFPALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGE 60

Query: 57  IKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRR 116
           + + +YP+A LG++R  L+ +  G L +       +  + P      LP++ +D DH   
Sbjct: 61  LNIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYN 120

Query: 117 MFESDFGQGVRDEMLQKFNWRALDTWYNG-TRETTSNRPLNSIEDFKGLKLRVPNAKQNL 175
           + +SD G+ +      K  +  L TWY+G  R   + +P+   +D  G+K+RV  +   +
Sbjct: 121 VLKSDLGKRILASSESK-GFVGL-TWYDGGARSFYAGKPITQPDDLAGMKIRVQQSPSAI 178

Query: 176 NYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQM 235
              K  G  PTPM+  E+Y ALQ   VDG EN       M+  EV K  +   H +   +
Sbjct: 179 AMVKALGGVPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDV 238

Query: 236 VIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKT---QEAELVSFFKSEGINVTYPDL 292
           ++IS     KLSD ++    KA+ K  D   Q +K      AE  ++   + +N T  D+
Sbjct: 239 LVISTKVLNKLSDKER----KALYKAADESMQQMKDVIWPAAEKEAYESMKAMNATVVDI 294

Query: 293 E--PFREAMQPLYKEFDSNIGQ 312
           +   F++ ++PL+ EF +   Q
Sbjct: 295 DKSAFKQRVKPLFDEFRAKDAQ 316