Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., C4-dicarboxylate-binding periplasmic protein DctP from Azospirillum sp. SherDot2

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 77/286 (26%), Positives = 131/286 (45%), Gaps = 12/286 (4%)

Query: 46  ADTLEEMSQGEIKLALYPSAQL--GDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVM 103
           A+ ++E + G I + +YP   L  GD       L  G +D+           +       
Sbjct: 55  AELVKEKTGGRINIKMYPGTSLVNGDQTKEFTALRQGTIDMAVGSTINWSPQVKELNLFS 114

Query: 104 LPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRE-TTSNRPLNSIEDFK 162
           LP++  D   L  + + + G+ +  E+L   +   L    NG RE + S  P+ +  D K
Sbjct: 115 LPFLMPDHKALDALTQGEVGKKLF-ELLASKDVMPLAWGENGFREISNSKHPIRTPADLK 173

Query: 163 GLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEV-Q 221
           GLK+RV  +   L+     GA+PT MS+++   AL T AVDGQENPL      K   + Q
Sbjct: 174 GLKIRVVGSPLYLDTFTALGANPTQMSWADAQPALSTGAVDGQENPLAIFVAAKLATLGQ 233

Query: 222 KNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQ-KAVQKVGDAHTQTVKTQEAELVSFF 280
           KNL +  ++ +  + ++++  W   S  D++ ++  AVQ   +    + K   A+  S  
Sbjct: 234 KNLTLWGYVADPLIFVVNKEVWASWSKEDQEAVRAAAVQAAAEEVAISRKGITADDDSLL 293

Query: 281 KS------EGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAA 320
           K       E + +T    + F+ A QP++ ++   IG  +V    A
Sbjct: 294 KEITAQGVEVVRLTPDQQKAFQTATQPVFDKWAKQIGPDLVKAAQA 339