Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., C4-dicarboxylate-binding periplasmic protein DctP from Azospirillum sp. SherDot2

 Score =  134 bits (337), Expect = 3e-36
 Identities = 83/284 (29%), Positives = 156/284 (54%), Gaps = 10/284 (3%)

Query: 42  AKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDI---TYAEFGRMGLWIPR 98
           A+   +  E+++ G++K+ +YP++QL  D+  L+ L LG + +   + A+FG +G     
Sbjct: 49  AEKFKELAEKLTAGKVKIEVYPNSQLYKDKEELEALQLGAVQMLAPSLAKFGPLGA--KE 106

Query: 99  AEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSI 158
            E   LPY+    + L+R+ + + G+ +  ++  K     L  W NG +  ++N+PL   
Sbjct: 107 FEVFDLPYIFPSKEVLQRVTKGEIGKKLFQKLESK-GIIGLAYWDNGFKIMSANKPLIKP 165

Query: 159 EDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFY 218
           ED KGLK+R+ ++K      +  GA P  M+FSEVY ALQT  VDG ENP   + T K +
Sbjct: 166 EDVKGLKMRIQSSKVLDAQMRALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMH 225

Query: 219 EVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQE----A 274
           EVQKN  +T H      VI+++  W+ L    +  +++A+++  D      + +     A
Sbjct: 226 EVQKNATLTDHGYLGYAVIVNKKFWEGLPADVRGKLEEAMKEATDYANDIAQNENDVALA 285

Query: 275 ELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKL 318
           ++ +  K+E    T  + E + +A++P++K+ ++ +G+ ++  +
Sbjct: 286 QMKASGKTEFHTQTKEEREAWVKALKPVHKDAEARVGKDLIEAI 329