Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score =  135 bits (341), Expect = 1e-36
 Identities = 84/260 (32%), Positives = 140/260 (53%), Gaps = 4/260 (1%)

Query: 1   MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA 60
           MK      +A+      AS+  A TL +    +  S    SA   A+ + + + G++K+ 
Sbjct: 1   MKISKLYGLALAATMLVASIAQAETLTLSTPDADNSEITLSANKFAELVSKKTDGKLKIK 60

Query: 61  LYPSAQL--GDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMF 118
           ++P+  L  GD  A ++QL  G LD+          + P+  A+ +PY  +D D LR   
Sbjct: 61  VFPNGTLYGGDPSAGVKQLAGGSLDMLLNSTSLYATFNPKFTAIAIPYQFRDIDQLRVYL 120

Query: 119 ESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNR-PLNSIEDFKGLKLRVPNAKQNLNY 177
           +S+ G+ +  + L K     LD W    R+ T+++ P+ S  D KG+KLRVPN    + +
Sbjct: 121 DSELGKELSGD-LSKIGILGLDLWSRPLRQITNSKAPIKSPVDLKGMKLRVPNNPLWVEF 179

Query: 178 AKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVI 237
               GA+PTPM+F+EVY ALQ   VDGQENP+    + K YEVQK L +++HI +  ++ 
Sbjct: 180 FGAMGAAPTPMAFAEVYNALQLKVVDGQENPVNVPVSAKLYEVQKYLTISNHIADAWVLG 239

Query: 238 ISESTWQKLSDTDKDIIQKA 257
           ++ + ++ L +  K  +++A
Sbjct: 240 MNPARFEGLDEGFKTALKEA 259