Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., C4-dicarboxylate binding protein from Agrobacterium fabrum C58

 Score =  112 bits (280), Expect = 1e-29
 Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 5/285 (1%)

Query: 40  NSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRA 99
           N  K +   L++ S G++KL  +    LG D    Q L  G  +        +   IP  
Sbjct: 44  NGIKAMQACLDDKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGLIPSL 103

Query: 100 EAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRE-TTSNRPLNSI 158
               LP++  +      + +  FG  + ++ L++     L  W NG R  + S   +N  
Sbjct: 104 GVFDLPFLFANDKEADAVMDGAFGD-MMNKKLEEQGLVNLAYWENGFRNLSNSKHAVNKW 162

Query: 159 EDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFY 218
           EDF GLK+RV      L+  +  GA+ TPM+F EV+ AL+TNA+D QENP  TI T KFY
Sbjct: 163 EDFSGLKVRVMQNNIFLDTFQNLGANATPMAFGEVFSALETNAIDAQENPYVTIDTSKFY 222

Query: 219 EVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVS 278
           EVQK +  T+H     + + S+  +   +  ++  +++      D   + ++    + + 
Sbjct: 223 EVQKYVTETNHAYTPFLFLFSKPIFDSYTPEEQTALRECAVVGRDEERKVIRELNQKSLE 282

Query: 279 FFKSEGINVTYPDLEP---FREAMQPLYKEFDSNIGQPIVSKLAA 320
             K+ G+ V     E     RE    +Y++  + IG  +V  + A
Sbjct: 283 KIKAAGLEVNTLSPEEQTRIREKSMVVYEKHKAEIGADVVDAVLA 327