Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter from Variovorax sp. SCN45

 Score = 57.8 bits (138), Expect = 9e-14
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 21  LMAALLAVL-TWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFSD 79
           LM  + + L  +QI TR++L  P+ WSE L R+  ++M  +G  +A ++ + V++     
Sbjct: 22  LMLVIASALGVFQIVTRFVLEQPAEWSEILIRVSLIWMVFLGIPMAFRQGAMVSVDVLYR 81

Query: 80  KLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELITL-GISSSWMNYSLPVGG 138
             P + R  L   + +A L  +  ++  G+ +A R     +  L  IS  W   +LPVG 
Sbjct: 82  WSPPRVRRVLDAVVSVAALTLMLIVLWWGWDYAMRGRVQSMAGLESISMVWAYLALPVGS 141

Query: 139 VFMVF 143
           VF +F
Sbjct: 142 VFCLF 146