Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 41/135 (30%), Positives = 77/135 (57%), Gaps = 2/135 (1%)

Query: 17  ITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITF 76
           +   L+ A +AVL   +  R++L+ P +WS+ELA +LF+++ ++G  +A++R  H+ +T 
Sbjct: 57  LAAALVLADVAVLLAGVVARFVLHQPLIWSDELASMLFIWLAMLGAVVALRRGEHMRMTA 116

Query: 77  FSDKL-PEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELITLGISSSWMNYSLP 135
              KL P++ RL+  ++L  A L  +  +    +++A    F     L IS++W   +LP
Sbjct: 117 MVSKLPPQRRRLAEAIAL-YAALAFLAMVAWPAWEYASEERFITTPALDISNAWRAAALP 175

Query: 136 VGGVFMVFRQLEKIF 150
           VG V M    + ++F
Sbjct: 176 VGVVLMGMFAVLRLF 190