Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Variovorax sp. SCN45

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 13  IEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHV 72
           IE+ +TV +M AL  +    +  R+  +    W+EE +  L + + LV  + A+ R  H+
Sbjct: 34  IEDWLTVIIMGALALITFANVLVRYFTDSSFAWTEEFSVFLMIMLALVAGSAAVARDRHI 93

Query: 73  NITFFSD--KLPEKARLSLVLSLEIAVLVS-IGAIIVLGYQHAQRNAFFELIT--LGISS 127
            I +FS+   +  + RL+   +L IA+L + IGA+ +       R   FE  T  +G+ +
Sbjct: 94  RIEYFSESGSMARRKRLAQFGALTIAILFTLIGALSIRMVWDDYR---FEETTPGIGLPA 150

Query: 128 SWMNYSLPVGGVFMVFRQL 146
            W +  LP+    +  R +
Sbjct: 151 WWYSIWLPIVSFAIALRAI 169