Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 52.0 bits (123), Expect = 6e-12
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 19  VPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFS 78
           V L+  +L+V T  +G R++ ND   W+E LA  L +Y+  +G A+ ++ + H+ +    
Sbjct: 37  VGLIVLILSVQTQVVG-RYVFNDTPTWTEALALQLVLYITALGVAVGVRDAGHIGLESLV 95

Query: 79  DKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFEL-ITLGISSSWMNYSLPVG 137
             LPE  RL + + +  A++   GAI+        +  + EL   LG+ +     +L + 
Sbjct: 96  SLLPEWMRLKVEILIH-ALVALFGAIMTWSGWIWTKLKWDELDPMLGLPAGLDYLALVIA 154

Query: 138 GVFMVFRQLEKIFNLMK 154
           GV +V    E I  L++
Sbjct: 155 GVLIVLFSFEHIVALLR 171