Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 3/144 (2%)

Query: 13  IEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHV 72
           IE+ +TV  MA L  +    +  R+  +    W+EE +  L + + LV  + A+ R  H+
Sbjct: 34  IEDWLTVISMALLALITFGNVIARYFTDQSFAWTEEFSIFLMIVLTLVASSAAVARHRHI 93

Query: 73  NITFFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELIT--LGISSSWM 130
            I FF+D    + R  L L   +A+++    +  L  +    +  +E ++  LG+   W 
Sbjct: 94  RIEFFADAGSPRRRHLLALWGAMAMVLLFLLMAGLSVRMVWDHYIYEEVSPGLGVPQWWY 153

Query: 131 NYSLPVGGVFMVFRQLEKIFNLMK 154
           +  LP+  + +  R L + FN ++
Sbjct: 154 SMWLPILSLAIALRALGR-FNRLR 176