Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 3   LKMLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGC 62
           +++L   +N I       ++A ++A ++WQ+  R++ N PS   +E  ++LFM+M L+G 
Sbjct: 1   MRILTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGG 60

Query: 63  AIAIKRSSHVNITFFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLGY 109
                   H+ I   + KL      +L+L   I V++++ A+I + Y
Sbjct: 61  VYTAGLKKHLAIDLLAQKLSRTP--ALMLDSIIQVIITVFALIFMVY 105