Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., Predicted rhamnogalacturonide-specific TRAP-type transporter, small transmembrane component RhiB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 60.5 bits (145), Expect = 1e-14
 Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 3/156 (1%)

Query: 3   LKMLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGC 62
           +   RK ++ +   I   ++A ++ +  WQ+ +R++L  PS  +EE+ R L +++ ++G 
Sbjct: 1   MNTFRKGLDLLLGAICCLVLAIMVGIACWQVVSRYILGVPSTLTEEMLRFLLVWVSMLGM 60

Query: 63  AIAIKRSSHVNITFFSDKLPEKAR--LSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFEL 120
           A    +  H+++T   DK+    R    ++L + I +  SI  +I+ G + +  +     
Sbjct: 61  AFVAGQKQHISLTLLLDKVSPTIRGWWDIILQV-IFIAFSIWVLIIGGLKISAISMLQIS 119

Query: 121 ITLGISSSWMNYSLPVGGVFMVFRQLEKIFNLMKLL 156
             LGI    + Y+LP  GV ++   L  I + +K +
Sbjct: 120 PALGIPMGKIYYALPCAGVLIILYGLLNIVDALKAI 155