Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., TRAP transporter small permease from Escherichia coli ECRC62

 Score = 72.0 bits (175), Expect = 5e-18
 Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 6/155 (3%)

Query: 6   LRKIINNIEEIIT---VPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGC 62
           +R II +I  ++    + ++A ++A +TWQ+  R++   PS++++EL+RLLF+ + L G 
Sbjct: 1   MRNIIRSINALLAALNITILAIIVACVTWQVAARFIFTSPSIFTDELSRLLFICLGLFGG 60

Query: 63  AIAIKRSSHVNITFFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELIT 122
           A    ++ H+ I      L  KAR  L L ++I V++    I+V G      + F    T
Sbjct: 61  AYTAGQNRHLAIDLLPMMLKGKARRHLFLCIQIIVIIFATIIMVYGGGLLTMDTFDSGQT 120

Query: 123 ---LGISSSWMNYSLPVGGVFMVFRQLEKIFNLMK 154
              LG    ++  S+P+ GV ++   ++ +   +K
Sbjct: 121 SPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELK 155