Pairwise Alignments

Query, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., Sialic acid TRAP transporter permease protein SiaT from Azospirillum sp. SherDot2

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 2/166 (1%)

Query: 3   LKMLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGC 62
           L  + +++  + E+    L+AA + +L   I  R++L+ P  WS+ELA +LF+++ ++G 
Sbjct: 21  LAQVDRLLGWLSELPVALLVAAEVVILFTGIVARYVLHAPITWSDELASILFLWLAMLGV 80

Query: 63  AIAIKRSSHVNITFFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELIT 122
            +A +R  H+ +T F      +AR  L +    A L  +  +I+   + A          
Sbjct: 81  VVAFRRGEHMRMTAFVSWASPRARAFLDVFAVAAALCFLLLVILPAGEFAWEELEITTPA 140

Query: 123 LGISSSWMNYSLPVGGVFMVFRQLEKIFNL--MKLLLGVSSSASLI 166
           L IS+ W   +LP G   M+   L ++  +  ++L+ G  ++ + I
Sbjct: 141 LQISNMWRAAALPTGLGLMIATALVRLARVGDVRLVAGALAAVAAI 186