Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

 Score =  185 bits (469), Expect = 4e-51
 Identities = 115/407 (28%), Positives = 197/407 (48%), Gaps = 4/407 (0%)

Query: 12  LFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSAG 71
           + +G+P+ FS       +L LT  T +     ++  G+ +  LLAVP F+  G L+   G
Sbjct: 220 VLSGVPIAFSFALATFGYLALTTRTPLLVMVGRLDEGMSHLILLAVPLFIFLGALIEMTG 279

Query: 72  ITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSM--RDAKY 129
           +   +  F  SL+GH+ G L +V I A  L SG+SGS +AD   +  +    M  R AK 
Sbjct: 280 MARAMIQFLASLLGHVRGGLSYVLIGAMYLVSGISGSKIADMAAIAPVLFPEMTKRGAKP 339

Query: 130 HDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSYF 189
            D  A  L +A+      +PPS+ L+  G V+  SI ALF  G +P ++   AL  + ++
Sbjct: 340 GDLVA--LLSATGAQTETIPPSIVLITIGSVTGVSIAALFTGGLLPAVVLGAALCAVVWW 397

Query: 190 ICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALFL 249
             ++     + + S+RE  K L  A  ++L P +I   +  G  T TE + +  +YA  +
Sbjct: 398 RYRREDLSGVQRYSKREIGKLLLVALPAVLLPFVIRAAVVEGVATATEVSTIGIVYAAVV 457

Query: 250 GTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISDN 309
           G VVY     +    +L +T + +  +  +V   T   W + +    Q LA    T+   
Sbjct: 458 GLVVYRQFDWRRLKPMLVDTASLSGAIIFIVGCATAMAWGLTQSGFSQDLARVMGTLPGG 517

Query: 310 PLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILT 369
               L +  +  + LG+ +E +  ++L  P L P+A A G+  VH+ ++ I ++ IG+  
Sbjct: 518 AYGFLAVSIVAFIVLGSVLEGIPAIVLFGPLLFPIAKAAGVHEVHYAMVVIFSMGIGLFA 577

Query: 370 PPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTL 416
           PP G+  Y    V  +      R +   +  + + L +VA+FP F++
Sbjct: 578 PPFGVGYYGACAVSKVNPDEGIRHIWGYIGAMLVGLVIVALFPWFSI 624