Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  251 bits (640), Expect = 4e-71
 Identities = 147/424 (34%), Positives = 236/424 (55%), Gaps = 7/424 (1%)

Query: 8   WLGLLFAGMPVGFSLIFVALAFLIL----TNSTGINFAAQQMLGGIDNFTLLAVPFFVLT 63
           +LG +FAG+P+  +L     A + +    T   G+    Q    G+  + LLA+P FVL 
Sbjct: 10  FLGAMFAGVPIAAALGLAGAAAIAMADFNTQWFGLLAVPQNFYAGLGKYPLLAIPMFVLV 69

Query: 64  GHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKS 123
           G + + +G+  R+ NFA ++VG   G L  V I+ ++   G+SGS  A+A  +G + I +
Sbjct: 70  GSIFDRSGVALRLVNFAVAIVGRGPGMLPLVAIVVAMFLGGISGSGPANAAAVGGVMIAA 129

Query: 124 MRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGV-VSNTSIGALFLAGAIPGLLCCIA 182
           M  A Y   F+  +  A+     L+PPSV  +IY V V   S+ ALF AG +PG+L  IA
Sbjct: 130 MARAGYPGSFSASVVGAAAATDILIPPSVAFIIYSVLVPGASVPALFAAGMVPGVLAGIA 189

Query: 183 LMVMSYFICKKRGYMTLPKASRREQF-KSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAV 241
           L+V + ++ +K     L  A  R  F KSL+EA   L  PV+I+GG+ +G FTPTEAA V
Sbjct: 190 LIVPAVWLARKHKMGALEAAMPRPPFWKSLREALWGLAAPVLILGGMRAGWFTPTEAAVV 249

Query: 242 SSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLAD 301
           +  Y LF+G V++ T+ ++    IL+E    + ++ L+V    +F + ++   +   +A+
Sbjct: 250 AVFYGLFVGMVIHRTIAVRDLFPILREAGELSGIILLVVSLAGIFAFSLSTLGVIDPVAN 309

Query: 302 YFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAIL 361
             +        +L L+ LLL+ +G F++ +++ L+ VP L+P+      DPV FGV+  L
Sbjct: 310 AIVNSGLGEYGVLSLLILLLITVGMFLDGISIFLIFVPLLMPIMQHYNWDPVWFGVILTL 369

Query: 362 NLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPEL 421
            + +G  TPP+ + L V  R+  +   +  R V P+L+ +F+V+ LV  FPQ  L LP  
Sbjct: 370 KVALGQFTPPLAVNLMVSCRIAGVRMESTIRWVGPMLLAMFLVMVLVIAFPQLALWLPAR 429

Query: 422 FLGY 425
            LGY
Sbjct: 430 -LGY 432