Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  297 bits (761), Expect = 4e-85
 Identities = 151/408 (37%), Positives = 242/408 (59%)

Query: 10  GLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNS 69
           G +  GMP+ F+L+    A +I +        +Q+++ G D+F LLA+PFF+L G LMN+
Sbjct: 12  GAMAIGMPIAFALLVTGAALMIFSGEFDATLLSQKIVEGADSFPLLAIPFFMLAGELMNA 71

Query: 70  AGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKY 129
            GI+ RI +FA + +GHI G LG V I A+++ + +SGSA ADA  L  + I  MR A Y
Sbjct: 72  GGISRRIVDFALAWIGHIRGGLGIVAIAAAVIMAAISGSAAADAAALTAMLIPMMRKAGY 131

Query: 130 HDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSYF 189
               +GGL AA  +I P++PPS+ L+++GV++N SIG LF+A  +PGLL  +AL+    +
Sbjct: 132 DVARSGGLIAAGSVIAPVLPPSIALIVFGVIANVSIGKLFMAAIVPGLLMGVALVATWLW 191

Query: 190 ICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALFL 249
           I +K      P+    E+ +    A  +L+ P+ I+GG+  G FTPTEAA V+++YA  +
Sbjct: 192 ISRKEPGRMQPRTPMPERLRITARATWALIMPIGIVGGMKLGVFTPTEAAVVAAVYAFIV 251

Query: 250 GTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISDN 309
           G  VY  LT +    +L  +   +A V  ++    V  W++   ++PQ ++D    +  N
Sbjct: 252 GMFVYRELTWRMLYPLLLSSAKASAAVVFLIATALVSAWLITVSEIPQQVSDMLQPLIAN 311

Query: 310 PLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILT 369
           P +L+  +  L++ +GT ++    LL+L P L+P+    GIDPV+FGV+ ++N  IG++T
Sbjct: 312 PTLLMFAMMALVIVVGTALDFSPTLLILTPILMPIVREAGIDPVYFGVLFVMNNAIGLIT 371

Query: 370 PPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLL 417
           PP+G+ L VV     +    L +G+ P L+    VL L+ +FP   L+
Sbjct: 372 PPVGIVLNVVCSGARLQMGQLMKGLWPFLIAEVAVLFLLVIFPSIVLV 419