Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  305 bits (782), Expect = 1e-87
 Identities = 153/416 (36%), Positives = 253/416 (60%), Gaps = 1/416 (0%)

Query: 5   IFGWL-GLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLT 63
           IFG L  L+  GMP+  SL    L+FL L     I   A ++  GI+ F ++A+PFF+L 
Sbjct: 6   IFGLLIVLMLTGMPISISLGLTVLSFLFLFTQVPIESVALKLFTGIEKFEIMAIPFFILA 65

Query: 64  GHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKS 123
           G+ +   G+  R+ NFA ++VGH  G LG   +MA  LF+ +SGS+ A    +G + + +
Sbjct: 66  GNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACALFAAVSGSSPATVVAIGSIILPA 125

Query: 124 MRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIAL 183
           M    + + F  G+   S  +G L+PPS+ +V+Y V +NTS+GALF+AG IPGL+    L
Sbjct: 126 MVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVATNTSVGALFMAGVIPGLVLATVL 185

Query: 184 MVMSYFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSS 243
             ++++I  K  Y  LP A+  ++F++ +EA   L   VI+IGGI++G FTPTEAAA+S+
Sbjct: 186 GAVTWYIAWKNDYPRLPPATWAQRFRAFREAIWGLALIVIVIGGIYTGVFTPTEAAAMSA 245

Query: 244 LYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYF 303
           +YA  +   VY  + L+G  +IL  + + +A++  ++    +F +++A E +P  +AD+ 
Sbjct: 246 VYAFLIAVFVYKDMPLKGVGKILLSSASMSAMLLYIITNAVLFSFVLANENIPHAIADWI 305

Query: 304 LTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNL 363
           +      +  LL++N+LLL  G F+E  +++L++ P L PVA  +GIDP+HFG++ ++N+
Sbjct: 306 VGKELGVIAFLLVVNVLLLVAGNFMEPSSIVLIMAPILFPVAMKLGIDPIHFGILIVVNM 365

Query: 364 MIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLP 419
            +G+  PP+G+ LYV S +  +    LT  V P L+ +   L +V  +P  ++ LP
Sbjct: 366 EVGMCHPPVGLNLYVASGITKMGITELTVAVWPWLLAMLGFLMVVTYWPPLSIWLP 421