Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

 Score =  187 bits (474), Expect = 1e-51
 Identities = 119/436 (27%), Positives = 228/436 (52%), Gaps = 27/436 (6%)

Query: 11  LLFAGMPVGFSLIFVALAFLIL-TNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNS 69
           ++F+GMP+ F+L  VAL F++L   +  ++  AQ     + N  +LA+P F+L G  +  
Sbjct: 221 VMFSGMPIAFALGVVALIFMLLFMPAASVDTIAQNFYEELANVIILAIPLFILKGATIGR 280

Query: 70  AGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKY 129
           +   + +++   + +  I G LG  N +A  LF+ M+GS+ A    +G   I  MR   Y
Sbjct: 281 SNAGKDLYSALHAWLHRIPGGLGVANTIACGLFAAMAGSSPATCSAIGSAGIPEMRARGY 340

Query: 130 HDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSYF 189
              FA G+ AA   +G L+PPSV +++Y V +  S+G LFLAG  PGLL  +  +   Y 
Sbjct: 341 SPGFAAGIIAAGGTLGILLPPSVTMLLYAVAAEVSLGRLFLAGIGPGLL--LITLFAGYS 398

Query: 190 ICKKR-GYMTLPKASRREQFKSLKEA------------------FLSLLTPVIIIGGIFS 230
           + + R  Y    +A+      S   A                  F+++L  V+++  +++
Sbjct: 399 VLRYRHEYRRAERAAASHGTHSALLADEHYTTRQKIRMVVWVAPFVTILAGVMVV--LYA 456

Query: 231 GKFTPTEAAAVSSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVT-VFGWI 289
           G  TP+E A V ++ AL +  ++Y     +  + IL  T+  + ++ LM++G++ ++ ++
Sbjct: 457 GWATPSETAGVGAVLALLVIGLMYGIWRPRLLMPILTGTLRESTML-LMIIGMSLLYAYV 515

Query: 290 VAREQLPQMLADYFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVG 349
           ++  ++ Q  AD+ + ++ +   LL  I L  + LG F+  ++++L+  P ++P   A G
Sbjct: 516 MSHLRISQAAADWIIGLALSKWFLLAAILLFTVVLGFFLPPVSIILMTAPIILPPLKAAG 575

Query: 350 IDPVHFGVMAILNLMIGILTPPMGMALYVVSRVG-DIPFHTLTRGVLPLLVPLFIVLALV 408
            D + FGV+  + + +G++ PP+G+ ++V+  +  DIP   +  G LP ++ + + +   
Sbjct: 576 FDLIWFGVVMTVVMEMGLIHPPVGLNIFVIKNIAPDIPLRDIIWGTLPFVLIMMVAVVAC 635

Query: 409 AVFPQFTLLLPELFLG 424
            + P     LP   +G
Sbjct: 636 CLIPGIATWLPGAVMG 651