Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., C4-dicarboxylate ABC transporter from Escherichia coli ECOR38

 Score =  298 bits (762), Expect = 3e-85
 Identities = 158/409 (38%), Positives = 241/409 (58%), Gaps = 2/409 (0%)

Query: 12  LFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSAG 71
           LF  MPV  ++    L + +  ++  +  A Q+++      +LLA+PFF+L G LM+  G
Sbjct: 27  LFINMPVWLAMFCGILTYFLCYSNVPLMVAIQRLIATTQTPSLLAIPFFILLGTLMSYTG 86

Query: 72  ITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYHD 131
           I  RI   A  L+G + G LG  NI+ S +  G+S S LADA  L ++ +  M    Y  
Sbjct: 87  IAARILQIANVLIGRMRGGLGGANILVSTMMGGVSASNLADAAMLSRMMVPEMEQKGYSR 146

Query: 132 DFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMSYFIC 191
            FA  +TA+  +I P++PP + L++YG+V++ SIG++F+AG +PGLLC   L+V  + + 
Sbjct: 147 GFAAAITASGSLITPIIPPGIALILYGLVADVSIGSMFMAGILPGLLCSAMLIVTVWLVA 206

Query: 192 KKRGYMTLPK--ASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALFL 249
            +RG     +     +E   +L +A+ +L   V +IGGI +  FTPTEA AV+ L  +F+
Sbjct: 207 IRRGLKPSSEHWPKPKEVSVALVQAWPALFLIVAVIGGIRANIFTPTEAGAVAVLLVMFI 266

Query: 250 GTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISDN 309
           G V+Y  L +      L ET  +TA V L++M     GWI + E+    +A++  +++DN
Sbjct: 267 GFVIYRELKISHVFTALSETARSTASVMLIIMASAALGWIFSLERAGITVAEFVTSLTDN 326

Query: 310 PLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILT 369
             V LL+INLLLL LG F+E  A+LL+LVP L PV +  GIDPVHFG++ ILNL +G L+
Sbjct: 327 KYVFLLIINLLLLVLGMFLEGSAILLILVPLLKPVVAHFGIDPVHFGIIMILNLSLGTLS 386

Query: 370 PPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLL 418
           PP+G  + +V     I      R  +PLLV L ++L ++   P  +LLL
Sbjct: 387 PPVGTVMLLVCNTVQISVGQFMREAVPLLVSLILLLLVITYIPAISLLL 435