Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., TRAP transporter, DctM subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  295 bits (754), Expect = 2e-84
 Identities = 167/426 (39%), Positives = 258/426 (60%), Gaps = 14/426 (3%)

Query: 5   IFGWLGLLFAGMPVGFSLIFVALAFLILTNST--GINFAAQQMLGGIDNFTLLAVPFFVL 62
           +  ++ L+  G+PV +SL F +L  L++T +    +   AQ+M  G+++F+LLA+PFF+L
Sbjct: 10  VLSFITLMGLGVPVAWSLGFSSLLTLMVTVAAVPSMTTIAQRMGAGLNSFSLLAIPFFIL 69

Query: 63  TGHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIK 122
            G +MN  GI  R+ N AK+L G + G L +VN++A++LF  ++GSA+A A  LG +  K
Sbjct: 70  AGEIMNKGGIANRLINLAKALTGKLPGGLLYVNVIAAMLFGAIAGSAVAAASALGGILGK 129

Query: 123 SMRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSN-TSIGALFLAGAIPGLLCCI 181
            M D  Y  +    +   S   G ++PPS  L++Y + S   SI ALF+AG IPGL   +
Sbjct: 130 RMEDEGYPKELGVAVNVTSSTTGLVIPPSNVLIVYSLASGGVSIAALFVAGYIPGLFMGL 189

Query: 182 ALMVMS-YFICKKRGYMTLPKASRREQFKSLKEAFLS----LLTPVIIIGGIFSGKFTPT 236
            LM+ + YFI KK+    LP A     FK L + F S    L   VI+IGGI  G FT T
Sbjct: 190 LLMLTAAYFIKKKK----LP-AGEPTSFKELGKVFFSAAPSLTLLVIVIGGIVMGVFTAT 244

Query: 237 EAAAVSSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLP 296
           EA+A++ LY L L +  Y  L  +    IL ++  TTAVVA+++       W+++ E +P
Sbjct: 245 EASAIAVLYCLGL-SFFYGELKPRDLPAILLKSSATTAVVAMLIATSMAMSWVMSSEDIP 303

Query: 297 QMLADYFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFG 356
           Q ++   L++SDN  V+L++INL+LLF+G F++    +L+  P  +PV + +GIDPVHFG
Sbjct: 304 QSISAVLLSLSDNKFVILIIINLILLFVGIFMDMTPAVLIFTPIFLPVVTELGIDPVHFG 363

Query: 357 VMAILNLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTL 416
           ++ +LNL IG+ TPP+G  L++   V       + + +LP  + + I LA++ ++PQ TL
Sbjct: 364 IIMVLNLCIGLCTPPVGSVLFIGVGVAKTSISNVVKPLLPFFIAMIIGLAVITIWPQLTL 423

Query: 417 LLPELF 422
            LP LF
Sbjct: 424 WLPSLF 429