Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., Neu5Ac permease from Alteromonas macleodii MIT1002

 Score =  290 bits (743), Expect = 5e-83
 Identities = 149/412 (36%), Positives = 243/412 (58%), Gaps = 3/412 (0%)

Query: 11  LLFAGMPVGFSLIFVALAFLILTN--STGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMN 68
           LL   +P+  S+    L  ++++   +      AQ+M GG+++F LLA+PFFVL+G +M 
Sbjct: 15  LLLLNVPISISIGVATLLAMVMSMDIAPATITIAQRMAGGLNSFALLAIPFFVLSGLIMG 74

Query: 69  SAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAK 128
             GI +R+   A +L+G + G L  VN+++ +LF  +SGSA+A    +G   +  M+ A 
Sbjct: 75  RGGIAKRLIECAMALIGALPGGLALVNVVSCMLFGAISGSAVATTSAIGSFMLPEMKKAG 134

Query: 129 YHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSN-TSIGALFLAGAIPGLLCCIALMVMS 187
           Y  +F+  +TAA+   G L+PPS  L++Y + S   SI ALF+AG IPG++  +ALM++ 
Sbjct: 135 YEPNFSAAVTAAASTTGMLIPPSNILIVYAIASGGVSIAALFMAGYIPGIMVGLALMLVC 194

Query: 188 YFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYAL 247
           +   K +GY   P+   +   +    A  SL    ++IGGI  G FT TEA A++ +Y+L
Sbjct: 195 FIYAKMKGYPLSPRLPIKVVVEKTIAALPSLFLIFLVIGGIVGGVFTATEAGAIAVVYSL 254

Query: 248 FLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTIS 307
            L  V Y  +  +   +I  +   TTA+V L++   T   W+++ E +PQ L++  L+IS
Sbjct: 255 LLAVVFYKEVDAKALPDIFLKAAETTAIVMLLIAASTAMSWLLSFENIPQTLSNALLSIS 314

Query: 308 DNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGI 367
           DNPL++LLLINLLL+ +G F++    +L+  P  +PVA  +G+  + FG+M +LNL IG+
Sbjct: 315 DNPLLILLLINLLLIVVGAFLDMTPAVLIFTPIFLPVALELGMSELQFGIMLVLNLSIGL 374

Query: 368 LTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLP 419
            +PP+G  L++   +       + R ++PL V +F+VL LV     F+  LP
Sbjct: 375 CSPPVGAVLFITCAIAKTKLENIIRPLIPLYVAMFVVLMLVTYVAWFSEALP 426