Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  218 bits (555), Expect = 4e-61
 Identities = 131/404 (32%), Positives = 223/404 (55%), Gaps = 7/404 (1%)

Query: 9   LGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMN 68
           +GL+ A  P+  + +  A   +   ++          + G+  F LLA+PFF+L G L+ 
Sbjct: 205 VGLVLAA-PLAHAFLAAAYVAIAFGSTLPEPAIVSSTVTGMSKFLLLAIPFFLLAGSLLT 263

Query: 69  SAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAG-GLGQLEIKSMRDA 127
            +G+  ++  FA S+VGH    L    ++ S+LFSG SGS++A+A  G    + + ++  
Sbjct: 264 ISGVANQLVRFAASVVGHRRAGLAQTTLLTSVLFSGASGSSVANAAFGASTFQPELVKHG 323

Query: 128 KYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALMVMS 187
            Y    AG + AA+ ++  ++PPS+  +I    +N S+G+L + G   G L  + L V  
Sbjct: 324 -YPPAQAGAIIAATSVLDNVIPPSIAFLILATATNLSVGSLLVGGFFAGGLMAVCLGVAI 382

Query: 188 YFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYAL 247
           +     R   TLP+A+  E+++S   A  +    VI++ GI  G  T TEAAA+++LY L
Sbjct: 383 HL--SVRSVDTLPRATGAERWRSAIAAIPAFGLGVIVVVGIRIGIVTTTEAAALAALYTL 440

Query: 248 FLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTIS 307
            LG      L +       +++    A + L++     F +++A + +  ++ D+   + 
Sbjct: 441 LLGFGY--RLGVGRIFATFRQSAGEAAAIGLLIGTAGPFAFLLAVDNVSGLVTDFVTVLG 498

Query: 308 DNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGI 367
            + + +LLL NL+LL +G  ++  A +LL  P L+P A A GIDP+HFGV+ ++NLMI  
Sbjct: 499 GSKITVLLLSNLILLAVGLVLDIGAAILLFGPILLPAAVAAGIDPIHFGVILVVNLMIHG 558

Query: 368 LTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVF 411
           LTPP+GM ++VVS V  +P   L R V+P LV L + LA++ ++
Sbjct: 559 LTPPLGMLIFVVSGVTRVPAAALFRAVIPYLVSLLVALAILCLW 602