Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  286 bits (731), Expect = 1e-81
 Identities = 141/412 (34%), Positives = 247/412 (59%)

Query: 5   IFGWLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTG 64
           +  + GL   G+P+  +L   ++  L L  S  ++  +Q M   +++F L+AVP F+L G
Sbjct: 6   LIAFFGLSMLGVPLAIALALASVGTLWLFTSMPMDLLSQTMFSSMNSFLLVAVPLFILVG 65

Query: 65  HLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSM 124
            +M    + ERIF+FA+++VG + G LGHVN+++S++FSG+SGS++AD   +G +EIK+M
Sbjct: 66  TVMERGRVAERIFDFAEAMVGWLPGGLGHVNVISSVIFSGVSGSSVADIASVGAIEIKAM 125

Query: 125 RDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCIALM 184
               +   +A G+T  +  +  ++PPS+ +VI G ++N SIG L +AG +PGL   +A +
Sbjct: 126 ERHGFPKGYAVGMTLCTSTLSSIIPPSILIVIAGSIANVSIGTLLIAGLVPGLFIALAFL 185

Query: 185 VMSYFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSL 244
           V ++F     GY      + R    +   A L +LTP+I+I GI SG FTPTEAAA++ +
Sbjct: 186 VFNHFYSVHYGYNPPTPFNFRLVVVTGLRAILPMLTPLILIIGIASGLFTPTEAAAIAVV 245

Query: 245 YALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFL 304
           Y   LG +VY TL ++   EIL  T   +  +  +     +  W+   + LP+ +A+   
Sbjct: 246 YVAVLGVIVYRTLPVRELPEILISTARISGTILFIAATSQLAAWVFTFDGLPEQVAELLK 305

Query: 305 TISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLM 364
            ++  P+  +L+I + LL +G F+E++  + +L+P L+P   A+GIDP+HF ++ ++ L 
Sbjct: 306 AMNLGPMTGMLVIFVFLLIIGIFMEAIPAMFILIPVLMPPVEALGIDPIHFLIVTVMTLT 365

Query: 365 IGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTL 416
           +G++TPP+G+ L+  ++V ++    + RG L  +  L + +  + +FP  TL
Sbjct: 366 LGLVTPPVGVCLFAAAQVANMKIEDVIRGSLAPMTVLTLAIFALVLFPILTL 417