Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  304 bits (778), Expect = 4e-87
 Identities = 166/414 (40%), Positives = 239/414 (57%), Gaps = 3/414 (0%)

Query: 11  LLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSA 70
           L+  G P+ F L   + A ++      I    QQM  G++ F ++A+PFF+  G LM   
Sbjct: 13  LMLIGTPIAFCLGIASFATVLYLGLPPI-VVFQQMNSGMNVFAMMAIPFFIFAGDLMVRG 71

Query: 71  GITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYH 130
           GI  R+  FA  LVGH+ G LG VNI+AS LF G+SGSA+ADA  +G L I  M    Y 
Sbjct: 72  GIAHRLIRFAAGLVGHLRGGLGQVNIVASTLFGGISGSAVADASAVGGLMIPQMAKRGYD 131

Query: 131 DDFAGGLTAASCIIGPLVPPSVPLVIYGVVS--NTSIGALFLAGAIPGLLCCIALMVMSY 188
            D+A  +T  + II  ++PPS  +++Y + +  N S+  LF AG IPGLL   ALMV +Y
Sbjct: 132 KDYAVNVTVNAAIIALMIPPSHNMILYSIAAGGNVSVADLFTAGIIPGLLLAAALMVTAY 191

Query: 189 FICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYALF 248
            + +++GY + P     +    L  +F  +L   II GG+ SG FT TE++ ++ LYA  
Sbjct: 192 IVARRKGYPSEPFPGFSKLMYYLLASFPGILLIGIIFGGVRSGIFTATESSCIAVLYAFL 251

Query: 249 LGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISD 308
           +  +VY  L   GF+E +   V TTA+V L++     FGW++A  Q+  ++      ISD
Sbjct: 252 VAMLVYRELNWDGFVEAVMGAVRTTAMVLLVIGTAASFGWLMAFLQVQTLMIAAISAISD 311

Query: 309 NPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGIL 368
           NP+++LL+IN++LL LGTF++   ++++  P L+PV  A GIDPVHFGV+ ILN  IG+ 
Sbjct: 312 NPIIVLLVINVILLLLGTFMDMAPMVIISTPVLLPVVKAFGIDPVHFGVVMILNAGIGLN 371

Query: 369 TPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELF 422
           TPP+G  L+V   VG I      R + P       VL  V   P  +L LP LF
Sbjct: 372 TPPVGTVLFVGCAVGGITIREAMRTIWPFFGASIAVLLAVTYIPSLSLWLPSLF 425