Pairwise Alignments

Query, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  326 bits (835), Expect = 1e-93
 Identities = 171/416 (41%), Positives = 254/416 (61%), Gaps = 3/416 (0%)

Query: 2   VGSIFGWLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFV 61
           VGS+   LG +  G+PV FSL+F  +  +           AQ M+ G D FTLLA+PFF+
Sbjct: 7   VGSL---LGAMAIGVPVAFSLMFCGVVLMWYMGMFNTAIIAQNMISGADTFTLLAIPFFI 63

Query: 62  LTGHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEI 121
           L G LMNS G++ RI +FA +LVGHI G LG V I+A+++ + +SGSA AD   L  + I
Sbjct: 64  LAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMASISGSAAADTAALAAILI 123

Query: 122 KSMRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGLLCCI 181
             M  A Y+   +GGL AA  II P++PPS+  +++GV +N SI  LFLAG +PG+L  I
Sbjct: 124 PMMAKAGYNIPRSGGLIAAGGIIAPVIPPSMAFIVFGVAANVSITQLFLAGIVPGILMGI 183

Query: 182 ALMVMSYFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAV 241
           +L++    + +K     LPK S +E+  +   A  +L  PVII+GGI +G  TPTEAA V
Sbjct: 184 SLIIAWLIVVRKDNIKPLPKTSGKERLVATVRAGWALGMPVIILGGIKAGIMTPTEAAVV 243

Query: 242 SSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLAD 301
           ++ YALF+G V+Y  L       +L     +T+++  +V    V  W++    +P  +A 
Sbjct: 244 AAGYALFVGMVIYRELKPADLFHVLLRAAKSTSIIMFLVCAALVSAWLITAANIPNEVAG 303

Query: 302 YFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAIL 361
           Y   + D P++L++ + +L+  +GT ++    +L+L P L+P+    GIDPV+FGV+ I+
Sbjct: 304 YIEPLIDRPMLLMVAMMVLVFIVGTALDLTPTILILTPVLMPIVKQAGIDPVYFGVLFII 363

Query: 362 NLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLL 417
           N  IG++TPP+G+ L VVS VG IP   +T GV P LV   IVLAL+ +FP   ++
Sbjct: 364 NNAIGLITPPVGVVLNVVSGVGRIPLGKVTIGVWPFLVAETIVLALLVIFPDIVMV 419