Pairwise Alignments

Query, 298 a.a., N-acetylneuraminate lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., dihydrodipicolinate synthase from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 3/293 (1%)

Query: 4   LTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAE 63
           + G + A  TP      +++ ++ ++ +  +++G       GTTGE     VEE   + E
Sbjct: 2   IAGSMVALVTPMDAQGHLDWDSLGKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIE 61

Query: 64  RWVKAVDGKLDVILHTGALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCA 123
             VK V G++ VI  TGA S  + I LT++A+     A   + P + KP + + L ++  
Sbjct: 62  FVVKRVAGRIAVIAGTGANSTREAIELTKNAKKAGADACLLVTPYYNKP-TQEGLYQHFR 120

Query: 124 QVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIPNLYGAKFNNADLYEYQRCVRVSN 183
            +A A       Y   G +    D++   +     +PN+ G K    DL   +  +   +
Sbjct: 121 AIAEAVDIPQILYNVPGRTA--CDMQAATVIRLSTVPNIIGIKEATGDLQRAKDILAGVS 178

Query: 184 RKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDKVIA 243
             F +  G D      + +G  G +  T N A     ++  A   G      A+ +K++ 
Sbjct: 179 SDFLVYSGDDATAVELILLGGKGNISVTANVAPRAMSEMCAAAIAGDAVTARAIHEKLMP 238

Query: 244 IIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAGFL 296
           + + L         K A+   G+     RLP+  L++     +   +R +G L
Sbjct: 239 LNKTLFIESNPIPVKWALTEMGMMPDGIRLPLTRLSEACHEPLRQALRQSGVL 291